MicrobiomeAnalyst

Marker Data Profiling
(MDP)

Uploading 16S rRNA marker gene counts data

Shotgun Data Profiling
(SDP)

Uploading shotgun metagenomics counts data

Taxon Set Analysis
(TSA)

Uploading a list of taxonomy names of interest

Projection with Public Data
(PPD)

Co-analysis of a 16S rRNA data with a public data

News & Updates

Please reach us through our OmicsForum to ask questions or request features regarding MicrobiomeAnalyst.
Added support for interactive stacked bar/area plot - click-and-drag to zoom and mouse-over for details (11/25/2022); ;
Added support for Tax4Fun 2.0 for predicting functional profiles based on 16S rRNA data (11/15/2022); ;
We are testing our OmicsBot (bottom-right of each page) for better analysis support.
Added support for Tax4Fun 2.0 for predicting functional profiles based on 16S rRNA data (11/15/2022); ;
Added support for Microbiome Regression-based Kernel Association Test (MiRKAT) in beta diversity analysis (11/14/2022); ;
Fixed Tax4Fun name mapping issue due to special characters (11/10/2022) ;
Added support for interactive heatmaps (11/08/2022); ;
Added support for downloading sample (library) sizes as a csv table (09/28/2022);
Enhanced message for metadata filtering (08/29/2022);

Read more ......

Chong, J., Liu, P., Zhou, G., and Xia. J. (2020) "Using MicrobiomeAnalyst for comprehensive statistical, functional, and meta-analysis of microbiome data" Nature Protocols 15, 799–821 (DOI: 10.1038/s41596-019-0264-1)
Dhariwal, A., Chong, J., Habib, S., King, I., Agellon, LB., and Xia. J. (2017) "MicrobiomeAnalyst - a web-based tool for comprehensive statistical, visual and meta-analysis of microbiome data" Nucleic Acids Research 45, W180-188 (DOI: 10.1093/nar/gkx295)